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  5. Sro833_g208530.1

Sro833_g208530.1 (Contig120.g1359)


Aliases : Contig120.g1359

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro833_g208530.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.06 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.06 OrthoFinder
Sro1587_g284230.1 Contig878.g9433 Hypothetical protein 0.04 OrthoFinder
Sro1587_g284240.1 Contig878.g9434 Hypothetical protein 0.03 OrthoFinder
Sro160_g072320.1 Contig2985.g23728 Hypothetical protein 0.03 OrthoFinder
Sro1944_g306940.1 Contig4559.g34042 Hypothetical protein 0.03 OrthoFinder
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.02 OrthoFinder
Sro2251_g320840.1 Contig398.g5372 Retrotransposon protein 0.02 OrthoFinder
Sro2710_g335240.1 Contig3750.g28728 Hypothetical protein 0.02 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.05 OrthoFinder
Sro291_g109530.1 Contig4055.g31099 Hypothetical protein 0.03 OrthoFinder
Sro3038_g342610.1 Contig4328.g32647 Retrotransposon protein 0.01 OrthoFinder
Sro3043_g342690.1 Contig2893.g23072 Hypothetical protein 0.03 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.01 OrthoFinder
Sro3381_g347460.1 Contig1231.g11558 Hypothetical protein 0.02 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.06 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.04 OrthoFinder
Sro422_g139700.1 Contig292.g3818 Retrotransposon protein 0.04 OrthoFinder
Sro476_g150560.1 Contig4641.g34588 Hypothetical protein 0.04 OrthoFinder
Sro715_g191780.1 Contig4130.g31590 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!