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  5. Sro827_g207840.1

Sro827_g207840.1 (Contig2896.g23089)


Aliases : Contig2896.g23089

Description : Sm-like protein LSM5


Gene families : OG_01_0005497 (OrthoFinder) Phylogenetic Tree(s): OG0005497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro827_g207840.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
XM_002503572.1 MICPUN_83618, 83618 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 10 81
No external refs found!