1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro827_g207820.1

Sro827_g207820.1 (Contig2896.g23087)


Aliases : Contig2896.g23087

Description : Inherit from COG: Desaturase


Gene families : OG_01_0001828 (OrthoFinder) Phylogenetic Tree(s): OG0001828_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro827_g207820.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020734.51 tig00020734_g13603.t1 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.06 OrthoFinder
Cre13.g587500 30784280 Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.06 OrthoFinder
Cz08g09110.t1 No alias Amine oxidase [Interproscan]. 0.01 OrthoFinder
Dusal.0372s00006.1 33200473 Amine oxidase [Interproscan]. 0.02 OrthoFinder
EOD13299 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.04 OrthoFinder
EOD18312 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.01 OrthoFinder
OT_03G04400.1 No alias Amine oxidase [Interproscan]. 0.03 OrthoFinder
PTI_03G03000.1 No alias Amine oxidase [Interproscan]. 0.08 OrthoFinder
PTI_21G02010.1 No alias Amine oxidase [Interproscan]. 0.07 OrthoFinder
Sro1688_g291260.1 Contig1668.g15026 Chloroplastic/chromoplastic 0.03 OrthoFinder
TP15G02480.1 No alias Amine oxidase [Interproscan]. 0.06 OrthoFinder
Transcript_contig_63477 63477 Amine oxidase [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0004.1 32884377 Amine oxidase [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0269.1 32889462 Amine oxidase [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 98 590
No external refs found!