1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro815_g206420.1

Sro815_g206420.1 (Contig3639.g28090)


Aliases : Contig3639.g28090

Description : Ankyrin containing protein (ISS)


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro815_g206420.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Sro1131_g244710.1 Contig1944.g16715 Hypothetical protein 0.05 OrthoFinder
Sro1256_g256680.1 Contig2043.g17573 Ankyrin repeat protein 0.02 OrthoFinder
Sro1365_g266550.1 Contig1439.g13236 Ankyrin repeat protein 0.08 OrthoFinder
Sro173_g076240.1 Contig2926.g23305 Ankyrin repeat protein 0.05 OrthoFinder
Sro1872_g302830.1 Contig3496.g27136 Ankyrin repeat protein 0.04 OrthoFinder
Sro1890_g303740.1 Contig981.g9968 Ankyrin repeat protein 0.03 OrthoFinder
Sro1915_g305120.1 Contig3943.g30228 Ankyrin repeat protein 0.03 OrthoFinder
Sro213_g088360.1 Contig1149.g10976 Ankyrin repeat protein 0.02 OrthoFinder
Sro266_g103120.1 Contig1823.g16043 Ankyrin repeat protein 0.04 OrthoFinder
Sro279_g106680.1 Contig3140.g24907 Ankyrin repeat protein 0.1 OrthoFinder
Sro3429_g347940.1 Contig1653.g14876 Ankyrin repeat protein 0.04 OrthoFinder
Sro363_g126840.1 Contig698.g8123 Ankyrin repeat protein 0.03 OrthoFinder
Sro43_g026440.1 Contig2453.g20110 Ankyrin repeat protein 0.03 OrthoFinder
Sro447_g144940.1 Contig3064.g24416 Ankyrin containing protein (ISS) 0.04 OrthoFinder
Sro480_g151330.1 Contig2927.g23334 Ankyrin repeat protein 0.08 OrthoFinder
Sro64_g036450.1 Contig2497.g20479 Ankyrin repeat protein 0.04 OrthoFinder
Sro82_g044090.1 Contig4032.g31000 Ankyrin repeat protein 0.03 OrthoFinder
Sro8_g006430.1 Contig89.g956 Ankyrin repeat protein 0.05 OrthoFinder
Sro8_g006880.1 Contig89.g1001 Ankyrin repeat protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 274 346
No external refs found!