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  5. Sro79_g042810.1

Sro79_g042810.1 (Contig1826.g16088)


Aliases : Contig1826.g16088

Description : Thioredoxin H-type


Gene families : OG_01_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro79_g042810.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cre03.g157800 30786929 Redox homeostasis.chloroplast redox homeostasis.ACHT... 0.03 OrthoFinder
Cre05.g248500 30783293 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder
Dusal.0328s00004.1 33194979 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Dusal.0596s00006.1 33195276 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
EOD22362 No alias Thioredoxin H-type [Ensembl]. 0.01 OrthoFinder
PTI_18G00650.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_002503495.1 MICPUN_59955, 59955 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000620.1_cds_GFH13511.1_7988 HaLaN_09410, GFH13511 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002622.1_cds_GFH24744.1_19221 HaLaN_22597, GFH24744 Thioredoxin F, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497058.1_787 KAA8497058 Thioredoxin-like 3-1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 66 153
No external refs found!