1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro79_g042660.1

Sro79_g042660.1 (Contig1826.g16073)


Aliases : Contig1826.g16073

Description : Protein L19


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro79_g042660.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322500 30774415, MRPL19 No description available 0.04 OrthoFinder
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.06 OrthoFinder
Cz09g01050.t1 No alias Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.05 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
Dusal.1340s00002.1 33194069 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
OT_14G02200.1 No alias Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
OT_20G00580.1 No alias Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
PTI_01G09470.1 No alias Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
TPCG00110.1 No alias Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0175.1 32896050 Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
XM_002505476.1 MICPUN_87955, 87955 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
XM_003063550.1 MicpuC2_9123, 9123 Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder
XM_003063582.1 MicpuC2_11548, 11548 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09633.1_4110 HaLaN_04811, GFH09633 50S ribosomal protein L19, chloroplastic 0.01 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56055.1_10000 PRW56055 50S ribosomal L19-chloroplastic 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 98 199
No external refs found!