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  5. Sro781_g201590.1

Sro781_g201590.1 (Contig678.g7942)


Aliases : Contig678.g7942

Description : B-type cyclin


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro781_g201590.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre08.g370401 30773725 Cyclin-B2-2 OS=Arabidopsis thaliana 0.02 OrthoFinder
PTI_33G00170.1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
Vocar.0011s0177.1 32895185 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.01 OrthoFinder
Vocar.0037s0088.1 32897567 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000053.1_cds_GFH06727.1_1204 HaLaN_01405, GFH06727 Cyclin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495714.1_1712 KAA8495714 G2/mitotic-specific cyclin-A 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492954.1_2690 KAA8492954 Cyclin-B2-2 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 134 261
IPR004367 Cyclin_C-dom 264 376
No external refs found!