1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro781_g201560.1

Sro781_g201560.1 (Contig678.g7939)


Aliases : Contig678.g7939

Description : Protein homooligomerization


Gene families : OG_01_0000287 (OrthoFinder) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro781_g201560.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.41 tig00000076_g2339.t1 No description available 0.01 OrthoFinder
Dusal.0195s00001.1 33196574 Hypothetical protein 0.01 OrthoFinder
Dusal.0556s00013.1 33195352 PHR [Interproscan]. 0.01 OrthoFinder
EOD13164 No alias Potassium channel tetramerisation-type BTB domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58861.1_7181 PRW58861 BTB POZ domain-containing KCTD21 isoform X2 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0051260 protein homooligomerization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0018822 nitrile hydratase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR003131 T1-type_BTB 94 166
No external refs found!