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Aliases : Contig4354.g32829
Description : Zinc finger, RING-type [Interproscan].
Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro779_g201390.1 | |
| Cluster | HCCA: Cluster_321 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz07g13230.t1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.2652s00001.1 | 33190881 | Zinc finger, RING-H2-type [Interproscan]. | 0.01 | OrthoFinder | |
| OT_13G02020.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498945.1_7898 | KAA8498945 | E3 ubiquitin-protein ligase | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003880 | protein C-terminal carboxyl O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | IEP | Enrichment |
| CC | GO:0005869 | dynactin complex | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| BP | GO:0006481 | C-terminal protein methylation | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| MF | GO:0010340 | carboxyl-O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| BP | GO:0018410 | C-terminal protein amino acid modification | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0043687 | post-translational protein modification | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| MF | GO:0051998 | protein carboxyl O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 199 | 248 |
| No external refs found! |