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  5. Sro774_g200580.1

Sro774_g200580.1 (Contig845.g9302)


Aliases : Contig845.g9302

Description : Prolycopene isomerase, chloroplastic


Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro774_g200580.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cz14g22040.t1 No alias Amine oxidase [Interproscan]. 0.02 OrthoFinder
EOD31741 No alias Phytoene desaturase [Ensembl]. 0.02 OrthoFinder
PTI_01G08810.1 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.03 OrthoFinder
Sro1228_g254380.1 Contig2695.g21739 Prolycopene isomerase, chloroplastic 0.03 OrthoFinder
Sro570_g168610.1 Contig131.g1484 Prolycopene isomerase, chloroplastic 0.03 OrthoFinder
TP15G02230.1 No alias NAD(P)-binding Rossmann-like domain; Amine oxidase... 0.02 OrthoFinder
Transcript_contig_61270 61270 Hypothetical protein 0.02 OrthoFinder
XM_002505732.1 MICPUN_96715, 96715 Amine oxidase 0.02 OrthoFinder
XM_003063775.1 MicpuC2_42987, 42987 Amine oxidase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000127.1_cds_GFH07954.1_2431 HaLaN_02839, GFH07954 Prolycopene isomerase, chloroplastic 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497842.1_6795 KAA8497842 Prolycopene isomerase, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 54 466
No external refs found!