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Aliases : Contig1379.g12696
Description : Lin-54 homolog
Gene families : OG_01_0000428 (OrthoFinder) Phylogenetic Tree(s): OG0000428_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro773_g200530.1 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000037.21 | tig00000037_g10089.t1 | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.01 | OrthoFinder | |
| Dusal.0257s00025.1 | 33197523 | CRC domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD16931 | No alias | CRC domain [Interproscan]. | 0.01 | OrthoFinder | |
| OT_20G00820.1 | No alias | CRC domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_12G00460.1 | No alias | CRC domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro447_g144960.1 | Contig3064.g24418 | Lin-54 homolog | 0.03 | OrthoFinder | |
| Sro750_g196950.1 | Contig993.g10030 | Lin-54 homolog | 0.03 | OrthoFinder | |
| TP04G04200.1 | No alias | CRC domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_56865 | 56865 | CRC domain [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006528 | asparagine metabolic process | IEP | Enrichment |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016311 | dephosphorylation | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| BP | GO:0030099 | myeloid cell differentiation | IEP | Enrichment |
| BP | GO:0030154 | cell differentiation | IEP | Enrichment |
| BP | GO:0030218 | erythrocyte differentiation | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| BP | GO:0032502 | developmental process | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0048869 | cellular developmental process | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005172 | CRC | 144 | 179 |
| No external refs found! |