Sro769_g199870.1 (Contig2367.g19489)

Aliases : Contig2367.g19489

Description : Shock factor protein

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro769_g199870.1
Cluster	HCCA: Cluster_316

Target	Alias	Description	ECC score	Gene Family Method
PTI_03G04490.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_06G02420.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.04	OrthoFinder
PTI_23G00690.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
Sro168_g074930.1	Contig1642.g14824	Shock factor protein 4	0.04	OrthoFinder
Sro1900_g304250.1	Contig3998.g30694	Stress transcription factor B-2b	0.03	OrthoFinder
Sro53_g031420.1	Contig1592.g14482	Shock factor protein	0.04	OrthoFinder
Sro687_g187270.1	Contig4445.g33372	Stress transcription factor A	0.03	OrthoFinder
Sro800_g204320.1	Contig413.g5566	Heat stress transcription factor	0.04	OrthoFinder
Sro889_g216580.1	Contig1913.g16523	Stress transcription factor A-3	0.04	OrthoFinder
TP01G07040.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
TP01G11580.1	No alias	Hypothetical protein	0.02	OrthoFinder
TP04G07230.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
TP05G08480.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
TP13G02600.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0015276	ligand-gated ion channel activity	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0022834	ligand-gated channel activity	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	63	157

External Links

No external refs found!

Sro769_g199870.1 (Contig2367.g19489)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation