1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro762_g198750.1

Sro762_g198750.1 (Contig3620.g28016)


Aliases : Contig3620.g28016

Description : Cytoplasmic 60S subunit biogenesis factor REI1 homolog


Gene families : OG_01_0002863 (OrthoFinder) Phylogenetic Tree(s): OG0002863_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro762_g198750.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.69 tig00020554_g10849.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre17.g716400 30782796 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cz03g23060.t1 No alias ZN622/Rei1/Reh1, zinc finger C2H2-type [Interproscan]. 0.02 OrthoFinder
PTI_15G02070.1 No alias ZN622/Rei1/Reh1, zinc finger C2H2-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041661 ZN622/Rei1/Reh1_Znf-C2H2 155 248
No external refs found!