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  5. Sro752_g197130.1

Sro752_g197130.1 (Contig1730.g15437)


Aliases : Contig1730.g15437

Description : Protein sorting-associated protein 60


Gene families : OG_01_0002541 (OrthoFinder) Phylogenetic Tree(s): OG0002541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro752_g197130.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.8 tig00021432_g21199.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cre13.g577950 30784116, VPS60 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 OrthoFinder
Cz08g08220.t1 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
Dusal.0095s00031.1 33190277 Snf7 family [Interproscan]. 0.02 OrthoFinder
PTI_03G03320.1 No alias Snf7 family [Interproscan]. 0.06 OrthoFinder
Transcript_contig_53967 53967 Snf7 family [Interproscan]. 0.02 OrthoFinder
XM_002501866.1 MICPUN_112661, 112661 Snf7 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58821.1_7394 PRW58821 Charged multivesicular body 5-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 190
No external refs found!