Sro749_g196790.1 (Contig2460.g20136)


Aliases : Contig2460.g20136

Description : LSM domain


Gene families : OG_01_0005412 (OrthoFinder) Phylogenetic Tree(s): OG0005412_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro749_g196790.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
TP18G01140.1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 221 299
No external refs found!