Sro73_g040520.1 (Contig3929.g30153)


Aliases : Contig3929.g30153

Description : Protein of unknown function (DUF3493)


Gene families : OG_01_0001058 (OrthoFinder) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro73_g040520.1
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266900 30780099 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder
Cz05g07170.t1 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
EOD37263 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.01 OrthoFinder
TP01G04250.1 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1368 1368 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55195 55195 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0222.1 32891260 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
XM_002506235.1 MICPUN_109524, 109524 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
XM_003063496.1 MicpuC2_36464, 36464 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005675.1_cds_GFH31494.1_25971 HaLaN_30554, GFH31494 Acetylglucosaminyltransferase 0.02 OrthoFinder
lcl|BLLF01005690.1_cds_GFH31519.1_25996 HaLaN_30580, GFH31519 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR021883 LPA1-like 61 137
No external refs found!