1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro727_g193640.1

Sro727_g193640.1 (Contig1496.g13669)


Aliases : Contig1496.g13669

Description : Protein ClpB


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro727_g193640.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cre02.g090850 30785159, CLPB3 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cre02.g091400 30785781, CLPB2 Chaperone protein ClpB4, mitochondrial OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_05G04800.1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.01 OrthoFinder
PTI_04G03480.1 No alias ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp... 0.02 OrthoFinder
PTI_17G01580.1 No alias ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,... 0.05 OrthoFinder
TP09G00210.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.03 OrthoFinder
TP22G00720.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497588.1_6541 KAA8497588 Chaperone protein ClpB1 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491801.1_4809 KAA8491801 Chaperone protein ClpB 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 134 267
IPR003959 ATPase_AAA_core 536 700
IPR019489 Clp_ATPase_C 707 787
IPR041546 ClpA/ClpB_AAA_lid 274 374
No external refs found!