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  5. Sro718_g192230.1

Sro718_g192230.1 (Contig362.g4880)


Aliases : Contig362.g4880

Description : Diatom-specific cyclin


Gene families : OG_01_0000152 (OrthoFinder) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro718_g192230.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
PTI_22G00290.1 No alias Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
TP02G09970.1 No alias Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
TP06G03740.1 No alias Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.01 OrthoFinder
TP19G00960.1 No alias Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 81 191
IPR004367 Cyclin_C-dom 194 253
No external refs found!