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Aliases : Contig3352.g26230
Description : Polyubiquitin (Fragment)
Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro70_g038830.1 | |
| Cluster | HCCA: Cluster_146 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021318.73 | tig00021318_g20193.t1 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder | |
| EOD09394 | No alias | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_20G01710.1 | No alias | Superoxide dismutase, Nickel-type [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002503936.1 | MICPUN_60151, 60151 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002509204.1 | MICPUN_63158, 63158 | Sde2, N-terminal ubiquitin domain; Telomere stability... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Enrichment |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
| MF | GO:0042277 | peptide binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0045116 | protein neddylation | IEP | Enrichment |
| BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
| MF | GO:0046923 | ER retention sequence binding | IEP | Enrichment |
| BP | GO:0051235 | maintenance of location | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| MF | GO:0070403 | NAD+ binding | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | 3 | 74 |
| No external refs found! |