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  5. Sro702_g189870.1

Sro702_g189870.1 (Contig1416.g12990)


Aliases : Contig1416.g12990

Description : PFL-like enzyme TdcE


Gene families : OG_01_0001893 (OrthoFinder) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro702_g189870.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cre01.g044800 30789628, PFL1 Formate acetyltransferase (Fragment) OS=Chlamydomonas reinhardtii 0.02 OrthoFinder
TP11G02620.1 No alias Pyruvate formate lyase domain; Glycine radical domain... 0.04 OrthoFinder
TP11G02630.1 No alias Pyruvate formate lyase domain; Glycine radical domain... 0.04 OrthoFinder
TP22G00080.1 No alias Pyruvate formate lyase domain; Glycine radical domain... 0.04 OrthoFinder
TP22G00090.1 No alias Pyruvate formate lyase domain; Glycine radical domain... 0.04 OrthoFinder
lcl|BLLF01000237.1_cds_GFH09475.1_3952 HaLaN_04624, GFH09475 Pyruvate formate lyase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000237.1_cds_GFH09476.1_3953 HaLaN_04625, GFH09476 Formate C-acetyltransferase 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44925.1_1951 PRW44925 Formate acetyltransferase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008704 5-carboxymethyl-2-hydroxymuconate delta-isomerase activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 849 965
IPR001150 Gly_radical 671 776
IPR004184 PFL_dom 64 655
No external refs found!