1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro6_g005660.1

Sro6_g005660.1 (Contig175.g2071)


Aliases : Contig175.g2071

Description : Hypothetical protein


Gene families : OG_01_0002364 (OrthoFinder) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro6_g005660.1

Target Alias Description ECC score Gene Family Method Actions
Sro1022_g232310.1 Contig2862.g22945 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder
Sro1705_g292410.1 Contig4149.g31669 PiggyBac transposable element-derived protein [Interproscan]. 0.08 OrthoFinder
Sro1817_g299490.1 Contig1204.g11336 PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
Sro2036_g312090.1 Contig118.g1341 Hypothetical protein 0.11 OrthoFinder
Sro33_g021190.1 Contig2613.g21140 PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
Sro3459_g348250.1 Contig2360.g19375 PiggyBac transposable element-derived protein [Interproscan]. 0.07 OrthoFinder
Sro347_g122870.1 Contig477.g6455 PiggyBac transposable element-derived protein [Interproscan]. 0.11 OrthoFinder
Sro347_g122880.1 Contig477.g6456 PiggyBac transposable element-derived protein [Interproscan]. 0.09 OrthoFinder
Sro354_g124780.2 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.07 OrthoFinder
Sro477_g150790.1 Contig553.g7058 PiggyBac transposable element-derived protein 0.06 OrthoFinder
Sro832_g208500.1 Contig3251.g25666 Hypothetical protein 0.06 OrthoFinder
Sro832_g208510.1 Contig3251.g25667 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!