1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro691_g187800.1

Sro691_g187800.1 (Contig1133.g10875)


Aliases : Contig1133.g10875

Description : Thymidylate kinase


Gene families : OG_01_0002700 (OrthoFinder) Phylogenetic Tree(s): OG0002700_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro691_g187800.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cz01g01200.t1 No alias Thymidylate kinase-like domain [Interproscan]. 0.04 OrthoFinder
OT_07G01360.1 No alias Thymidylate kinase-like domain [Interproscan]. 0.03 OrthoFinder
TP02G04060.1 No alias Thymidylate kinase-like domain [Interproscan]. 0.03 OrthoFinder
XM_002499495.1 MICPUN_78442, 78442 Thymidylate kinase-like domain [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59003.1_6989 PRW59003 Thymidylate kinase-like isoform X2 0.03 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490373.1_5763 KAA8490373 Thymidylate kinase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR039430 Thymidylate_kin-like_dom 113 185
IPR039430 Thymidylate_kin-like_dom 38 102
No external refs found!