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  5. Sro687_g187280.1

Sro687_g187280.1 (Contig4445.g33373)


Aliases : Contig4445.g33373

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro687_g187280.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Sro307_g113190.1 Contig2839.g22789 Helicase 0.03 OrthoFinder
Sro32_g020660.1 Contig3715.g28539 Helicase 0.03 OrthoFinder
Sro939_g222390.1 Contig383.g5147 Helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 275 340
IPR005114 Helicase_assoc 348 416
No external refs found!