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  5. Sro685_g186950.1

Sro685_g186950.1 (Contig1991.g17050)


Aliases : Contig1991.g17050

Description : Hypothetical protein


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro685_g186950.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Sro107_g054030.1 Contig1548.g14078 Hypothetical protein 0.04 OrthoFinder
Sro1103_g241671.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.06 OrthoFinder
Sro118_g057580.1 Contig2714.g21828 Hypothetical protein 0.03 OrthoFinder
Sro118_g057590.1 Contig2714.g21829 Hypothetical protein 0.04 OrthoFinder
Sro1380_g267740.1 Contig4344.g32783 Hypothetical protein 0.03 OrthoFinder
Sro1449_g273700.1 Contig2836.g22760 Hypothetical protein 0.03 OrthoFinder
Sro156_g070870.1 Contig473.g6425 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro156_g070880.1 Contig473.g6426 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1664_g289480.1 Contig291.g3803 Hypothetical protein 0.09 OrthoFinder
Sro1700_g292080.1 Contig4692.g34891 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro178_g078110.1 Contig275.g3536 Hypothetical protein 0.04 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.03 OrthoFinder
Sro200_g084740.1 Contig201.g2365 Hypothetical protein 0.02 OrthoFinder
Sro205_g086350.1 Contig2217.g18448 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro2159_g317020.1 Contig1250.g11681 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro2344_g324160.1 Contig1082.g10518 Hypothetical protein 0.04 OrthoFinder
Sro241_g096370.1 Contig4317.g32555 Hypothetical protein 0.03 OrthoFinder
Sro2878_g339180.1 Contig4091.g31273 Hypothetical protein 0.07 OrthoFinder
Sro2929_g340410.1 Contig3350.g26215 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro315_g115270.1 Contig447.g6050 Hypothetical protein 0.03 OrthoFinder
Sro3332_g346900.1 Contig1403.g12872 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro39_g024380.1 Contig234.g2858 Hypothetical protein 0.04 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro582_g170440.1 Contig2996.g23800 Hypothetical protein 0.06 OrthoFinder
Sro634_g178951.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro697_g189030.1 Contig3345.g26202 Hypothetical protein 0.05 OrthoFinder
Sro697_g189120.1 Contig3345.g26211 Hypothetical protein 0.05 OrthoFinder
Sro697_g189130.1 Contig3345.g26212 Hypothetical protein 0.02 OrthoFinder
Sro74_g040870.1 Contig4700.g34949 Hypothetical protein 0.04 OrthoFinder
Sro796_g203640.1 Contig2034.g17462 Hypothetical protein 0.02 OrthoFinder
Sro796_g203650.1 Contig2034.g17463 Hypothetical protein 0.12 OrthoFinder
Sro85_g045380.1 Contig4580.g34215 CRAL-TRIO lipid binding domain [Interproscan]. 0.06 OrthoFinder
Sro94_g049130.1 Contig150.g1703 Hypothetical protein 0.05 OrthoFinder
Sro98_g050560.1 Contig3362.g26348 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!