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Aliases : Contig318.g4223
Description : RCC1 and BTB domain-containing protein 2
Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro670_g184710.1 | |
| Cluster | HCCA: Cluster_321 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g025900 | 30789384 | Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
| Dusal.0004s00027.1 | 33201009 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| OT_08G02470.1 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_1467 | 1467 | Hypothetical protein | 0.01 | OrthoFinder | |
| XM_003055521.1 | MicpuC2_37978, 37978 | Regulator of chromosome condensation (RCC1) repeat;... | 0.03 | OrthoFinder | |
| lcl|BLLF01000275.1_cds_GFH09923.1_4400 | HaLaN_05154, GFH09923 | HECT domain-containing protein | 0.02 | OrthoFinder | |
| lcl|BLLF01005733.1_cds_GFH31570.1_26047 | HaLaN_30640, GFH31570 | ANK_REP_REGION domain-containing protein | 0.01 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59723.1_6254 | PRW59723 | Ultraviolet-B receptor UVR8-like isoform X2 | 0.01 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496432.1_161 | KAA8496432 | Ultraviolet-B receptor UVR8 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004659 | prenyltransferase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| CC | GO:0005869 | dynactin complex | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Enrichment |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| CC | GO:0008290 | F-actin capping protein complex | IEP | Enrichment |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| CC | GO:0017119 | Golgi transport complex | IEP | Enrichment |
| BP | GO:0018342 | protein prenylation | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0022406 | membrane docking | IEP | Enrichment |
| CC | GO:0030008 | TRAPP complex | IEP | Enrichment |
| BP | GO:0030832 | regulation of actin filament length | IEP | Enrichment |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Enrichment |
| BP | GO:0030834 | regulation of actin filament depolymerization | IEP | Enrichment |
| BP | GO:0030835 | negative regulation of actin filament depolymerization | IEP | Enrichment |
| BP | GO:0030837 | negative regulation of actin filament polymerization | IEP | Enrichment |
| BP | GO:0031333 | negative regulation of protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Enrichment |
| BP | GO:0032272 | negative regulation of protein polymerization | IEP | Enrichment |
| BP | GO:0032535 | regulation of cellular component size | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Enrichment |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043242 | negative regulation of protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
| BP | GO:0048278 | vesicle docking | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
| BP | GO:0051016 | barbed-end actin filament capping | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Enrichment |
| BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Enrichment |
| BP | GO:0051640 | organelle localization | IEP | Enrichment |
| BP | GO:0051693 | actin filament capping | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0097354 | prenylation | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Enrichment |
| BP | GO:0140029 | exocytic process | IEP | Enrichment |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901879 | regulation of protein depolymerization | IEP | Enrichment |
| BP | GO:1901880 | negative regulation of protein depolymerization | IEP | Enrichment |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Enrichment |
| BP | GO:1902904 | negative regulation of supramolecular fiber organization | IEP | Enrichment |
| No external refs found! |