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  5. Sro654_g182120.1

Sro654_g182120.1 (Contig1277.g11902)


Aliases : Contig1277.g11902

Description : Specific histone demethylase 1 homolog


Gene families : OG_01_0000315 (OrthoFinder) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro654_g182120.1
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Cre07.g318651 30775077 Lysine-specific histone demethylase 1 homolog 3 OS=Oryza... 0.01 OrthoFinder
Cz01g18260.t1 No alias Amine oxidase; SWIRM domain [Interproscan]. 0.01 OrthoFinder
Dusal.0082s00011.1 33189244 NAD(P)-binding Rossmann-like domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_1299 1299 Amine oxidase [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56314 56314 Amine oxidase [Interproscan]. 0.01 OrthoFinder
XM_002504585.1 MICPUN_61392, 61392 Histone demethylase 0.01 OrthoFinder
XM_003063923.1 MicpuC2_23160, 23160 Amine oxidase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 555 793
No external refs found!