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  5. Sro653_g181950.1

Sro653_g181950.1 (Contig4252.g32187)


Aliases : Contig4252.g32187

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro653_g181950.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Sro1903_g304510.1 Contig4361.g32858 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro3186_g344880.1 Contig1814.g15987 MSMEG_5435/MSMEI_5285 0.03 OrthoFinder
Sro433_g141750.1 Contig4540.g33937 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro962_g225120.1 Contig891.g9480 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 12 438
IPR009081 PP-bd_ACP 1035 1085
No external refs found!