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  5. Sro653_g181920.1

Sro653_g181920.1 (Contig4252.g32184)


Aliases : Contig4252.g32184

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro653_g181920.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Sro1040_g234440.1 Contig3118.g24782 Amino acid adenylation 0.03 OrthoFinder
Sro1175_g249230.1 Contig1328.g12270 Hypothetical protein 0.03 OrthoFinder
Sro141_g065990.1 Contig65.g623 Amp-dependent synthetase and ligase 0.05 OrthoFinder
Sro225_g091720.1 Contig1661.g14970 D-alanine--D-alanyl carrier protein ligase 0.01 OrthoFinder
Sro3186_g344880.1 Contig1814.g15987 MSMEG_5435/MSMEI_5285 0.02 OrthoFinder
Sro3192_g344950.1 Contig3370.g26390 Hypothetical protein 0.05 OrthoFinder
Sro329_g118780.1 Contig2017.g17248 D-alanine--D-alanyl carrier protein ligase 0.01 OrthoFinder
Sro3579_g349300.1 Contig1649.g14866 Putative fatty-acid--CoA ligase FadD21 0.04 OrthoFinder
Sro613_g175590.1 Contig1327.g12249 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 15 441
No external refs found!