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  5. Sro650_g181440.1

Sro650_g181440.1 (Contig647.g7760)


Aliases : Contig647.g7760

Description : PIN2/TERF1-interacting telomerase inhibitor 1


Gene families : OG_01_0002250 (OrthoFinder) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro650_g181440.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre07.g347400 30774277 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder
Cz02g35040.t1 No alias G-patch domain [Interproscan]. 0.06 OrthoFinder
Dusal.0185s00003.1 33185832 G-patch domain [Interproscan]. 0.02 OrthoFinder
OT_01G03500.1 No alias G-patch domain [Interproscan]. 0.15 OrthoFinder
PTI_04G04430.1 No alias G-patch domain [Interproscan]. 0.07 OrthoFinder
TP01G00520.1 No alias G-patch domain [Interproscan]. 0.15 OrthoFinder
TP03G08160.1 No alias G-patch domain [Interproscan]. 0.16 OrthoFinder
Transcript_contig_54158 54158 G-patch domain [Interproscan]. 0.09 OrthoFinder
Vocar.0005s0050.1 32884038 G-patch domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000174.1_cds_GFH08637.1_3114 HaLaN_03626, GFH08637 G-patch domain-containing protein 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60174.1_6320 PRW60174 D111 G-patch domain-containing family 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497644.1_6597 KAA8497644 PIN2/TERF1-interacting telomerase inhibitor 1 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499929.1_8882 KAA8499929 G-patch domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000467 G_patch_dom 48 82
No external refs found!