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  5. Sro64_g036450.1

Sro64_g036450.1 (Contig2497.g20479)


Aliases : Contig2497.g20479

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro64_g036450.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Sro1131_g244710.1 Contig1944.g16715 Hypothetical protein 0.03 OrthoFinder
Sro1365_g266550.1 Contig1439.g13236 Ankyrin repeat protein 0.05 OrthoFinder
Sro1819_g299650.1 Contig1484.g13564 Ankyrin repeat protein 0.03 OrthoFinder
Sro279_g106680.1 Contig3140.g24907 Ankyrin repeat protein 0.05 OrthoFinder
Sro3429_g347940.1 Contig1653.g14876 Ankyrin repeat protein 0.03 OrthoFinder
Sro447_g144940.1 Contig3064.g24416 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro480_g151330.1 Contig2927.g23334 Ankyrin repeat protein 0.05 OrthoFinder
Sro815_g206420.1 Contig3639.g28090 Ankyrin containing protein (ISS) 0.04 OrthoFinder
Sro8_g006880.1 Contig89.g1001 Ankyrin repeat protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!