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  5. Sro647_g180850.1

Sro647_g180850.1 (Contig3562.g27501)


Aliases : Contig3562.g27501

Description : Leucine Rich Repeat


Gene families : OG_01_0000303 (OrthoFinder) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro647_g180850.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Sro1268_g257740.1 Contig4283.g32362 Receptor-like 0.04 OrthoFinder
Sro223_g091440.1 Contig370.g5013 Leucine Rich Repeat 0.05 OrthoFinder
Sro342_g121660.1 Contig3070.g24466 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro5_g004030.1 Contig4001.g30718 Fibronectin leucine rich transmembrane protein 2 0.04 OrthoFinder
Sro77_g042230.1 Contig338.g4618 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro7_g005830.1 Contig389.g5236 Receptor-like protein kinase precursor 0.03 OrthoFinder
Sro7_g005930.1 Contig389.g5246 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 399 416
No external refs found!