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  5. Sro637_g179390.1

Sro637_g179390.1 (Contig2599.g21060)


Aliases : Contig2599.g21060

Description : Cystathionine beta-synthase


Gene families : OG_01_0000200 (OrthoFinder) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro637_g179390.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000802.64 tig00000802_g4313.t1 Bifunctional cystathionine gamma-lyase/cysteine synthase... 0.01 OrthoFinder
OT_05G03220.1 No alias Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.02 OrthoFinder
PTI_01G00910.1 No alias Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold4.883 4.883 Pyridoxal-phosphate dependent enzyme; RNA polymerase... 0.01 OrthoFinder
Transcript_contig_78562 78562 Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494826.1_3356 KAA8494826 Cystathionine beta-synthase 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000644 CBS_dom 373 419
IPR001926 PLP-dep 29 322
No external refs found!