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  5. Sro626_g177820.1

Sro626_g177820.1 (Contig1809.g15957)


Aliases : Contig1809.g15957

Description : Thermosome subunit beta (Fragment)


Gene families : OG_01_0003257 (OrthoFinder) Phylogenetic Tree(s): OG0003257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro626_g177820.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.8 tig00001371_g8424.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cre01.g026550 30789046, CCT7 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.18 OrthoFinder
Cz09g09290.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.11 OrthoFinder
Dusal.0417s00003.1 33193601 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
EOD40691 No alias Chaperonin complex component, TCP-1 eta subunit [Ensembl]. 0.07 OrthoFinder
OT_15G00280.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.1 OrthoFinder
PTI_12G01110.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
TP06G02300.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Transcript_contig_56876 56876 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1013.1 32886064 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_002506651.1 MICPUN_106612, 106612 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003058413.1 MicpuC2_44294, 44294 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01003283.1_cds_GFH26903.1_21380 HaLaN_25134, GFH26903 T-complex protein 1 subunit eta 0.07 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494336.1_4200 KAA8494336 T-complex protein 1 subunit eta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 38 531
No external refs found!