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  5. Sro626_g177790.1

Sro626_g177790.1 (Contig1809.g15954)


Aliases : Contig1809.g15954

Description : Cleavage stimulation factor subunit 77


Gene families : OG_01_0002519 (OrthoFinder) Phylogenetic Tree(s): OG0002519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro626_g177790.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.68 tig00020710_g13320.t1 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.01 OrthoFinder
Cre12.g506050 30792895 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.04 OrthoFinder
Cz10g22020.t1 No alias Suppressor of forked [Interproscan]. 0.02 OrthoFinder
Dusal.0763s00003.1 33187816 Suppressor of forked [Interproscan]. 0.01 OrthoFinder
OT_08G01840.1 No alias Suppressor of forked [Interproscan]. 0.01 OrthoFinder
XM_003058464.1 MicpuC2_58109, 58109 Pre-mrna 3'-end processing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR008847 Suf 788 888
No external refs found!