1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro624_g177380.1

Sro624_g177380.1 (Contig2249.g18643)


Aliases : Contig2249.g18643

Description : Blue-light-activated histidine kinase


Gene families : OG_01_0000313 (OrthoFinder) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro624_g177380.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.26 tig00001042_g6598.t1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder
Cpa|evm.model.tig00001154.41 tig00001154_g7305.t1 RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder
Dusal.0229s00007.1 33187455 PAS domain; Protein kinase domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_89756 89756 PAS domain; Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01002218.1_cds_GFH23214.1_17691 HaLaN_20798, GFH23214 Putative LOV domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33030.1_3772 PRW33030 LOV domain-containing 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496839.1_568 KAA8496839 Serine/threonine-protein kinase nrc-2 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495663.1_1661 KAA8495663 Serine/threonine-protein kinase KIN82 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496025.1_2023 KAA8496025 Flippase kinase 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 215 305
No external refs found!