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  5. Sro619_g176470.1

Sro619_g176470.1 (Contig2168.g18158)


Aliases : Contig2168.g18158

Description : Cyclin-dependent kinases regulatory subunit 1


Gene families : OG_01_0002204 (OrthoFinder) Phylogenetic Tree(s): OG0002204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro619_g176470.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.5 tig00020780_g13757.t1 Cell cycle.regulation.cyclin-dependent kinase... 0.02 OrthoFinder
Cre03.g180350 30787507, CKS1 Cell cycle.regulation.cyclin-dependent kinase... 0.05 OrthoFinder
EOD12469 No alias Cyclin-dependent kinase, regulatory subunit [Interproscan]. 0.02 OrthoFinder
EOD24422 No alias Cyclin-dependent kinase, regulatory subunit [Interproscan]. 0.03 OrthoFinder
PTI_07G02590.1 No alias Cyclin-dependent kinase, regulatory subunit [Interproscan]. 0.02 OrthoFinder
TP14G01990.1 No alias Cyclin-dependent kinase, regulatory subunit [Interproscan]. 0.04 OrthoFinder
XM_002500015.1 MICPUN_78882, 78882 Hypothetical protein (CKS) 0.03 OrthoFinder
XM_003057821.1 MicpuC2_57520, 57520 Cyclin-dependent kinase, regulatory subunit [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005305.1_cds_GFH31030.1_25507 HaLaN_29981, GFH31030 Cyclin-dependent kinases regulatory subunit 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57792.1_8442 PRW57792 Cyclin-dependent kinases regulatory subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 5 71
No external refs found!