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  5. Sro611_g175390.1

Sro611_g175390.1 (Contig1882.g16420)


Aliases : Contig1882.g16420

Description : Putative calcium-binding mitochondrial carrier F55A11.4


Gene families : OG_01_0000206 (OrthoFinder) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro611_g175390.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cz01g03210.t1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
Cz06g07120.t1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
Dusal.0316s00014.1 33189595 Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
OT_03G04370.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
Vocar.0011s0266.1 32895212 Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
XM_003055402.1 MicpuC2_12392, 12392 Mitochondrial carrier family 0.01 OrthoFinder
XM_003063443.1 MicpuC2_4326, 4326 Mitochondrial carrier family 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 269 360
IPR018108 Mitochondrial_sb/sol_carrier 161 249
IPR018108 Mitochondrial_sb/sol_carrier 22 119
No external refs found!