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  5. Sro608_g174820.1

Sro608_g174820.1 (Contig3978.g30565)


Aliases : Contig3978.g30565

Description : Harbinger transposase-derived nuclease domain [Interproscan].


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro608_g174820.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Sro116_g057100.1 Contig2228.g18486 Hypothetical protein 0.02 OrthoFinder
Sro1182_g249960.1 Contig4113.g31393 Hypothetical protein 0.03 OrthoFinder
Sro1259_g256891.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.09 OrthoFinder
Sro1262_g257090.1 Contig187.g2166 Hypothetical protein 0.05 OrthoFinder
Sro160_g072100.1 Contig2985.g23706 Hypothetical protein 0.1 OrthoFinder
Sro2085_g313830.1 Contig3037.g24219 Harbinger transposase-derived nuclease domain [Interproscan]. 0.04 OrthoFinder
Sro217_g089630.1 Contig1718.g15337 Hypothetical protein 0.02 OrthoFinder
Sro262_g102081.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder
Sro292_g109750.1 Contig484.g6545 Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro2988_g341730.1 Contig1825.g16064 Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro3100_g343730.1 Contig1645.g14850 Hypothetical protein 0.11 OrthoFinder
Sro412_g137830.1 Contig2922.g23255 Hypothetical protein 0.04 OrthoFinder
Sro4136_g353120.1 Contig3023.g24106 Hypothetical protein 0.03 OrthoFinder
Sro462_g148040.1 Contig196.g2283 Hypothetical protein 0.04 OrthoFinder
Sro471_g149640.1 Contig458.g6177 Hypothetical protein 0.08 OrthoFinder
Sro712_g191290.1 Contig2484.g20334 Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder
Sro76_g041480.1 Contig184.g2126 Hypothetical protein 0.09 OrthoFinder
Sro804_g204910.1 Contig3806.g29164 Hypothetical protein 0.04 OrthoFinder
Sro996_g229350.1 Contig2630.g21349 Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 184 290
No external refs found!