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  5. Sro603_g173820.2

Sro603_g173820.2


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000910 (OrthoFinder) Phylogenetic Tree(s): OG0000910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro603_g173820.2
Cluster HCCA: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Cre06.g290500 30779610 Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 OrthoFinder
EOD13231 No alias Protein kinase domain [Interproscan]. 0.03 OrthoFinder
EOD33965 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
PTI_21G02360.1 No alias Protein kinase domain; WD40 repeat [Interproscan]. 0.01 OrthoFinder
Sro1058_g236430.1 Contig518.g6833 Phosphoinositide 3-kinase regulatory subunit 4 0.06 OrthoFinder
Sro1058_g236440.1 Contig518.g6834 Phosphoinositide-3-kinase, regulatory subunit 4 0.04 OrthoFinder
Vocar.0001s1556.1 32885670 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
XM_003055232.1 MicpuC2_50868, 50868 Protein kinase domain; WD40 repeat [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57315.1_8804 PRW57315 Putative serine threonine-kinase vps15 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 352 381
No external refs found!