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  5. Sro5_g004790.1

Sro5_g004790.1 (Contig4001.g30794)


Aliases : Contig4001.g30794

Description : Repeat domain-containing protein 42


Gene families : OG_01_0000406 (OrthoFinder) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro5_g004790.1
Cluster HCCA: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
PTI_11G02030.1 No alias Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder
PTI_26G01100.1 No alias Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder
PTI_28G00390.1 No alias Ankyrin repeat [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55673 55673 Ankyrin repeat-containing domain; Ankyrin repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 368 437
No external refs found!