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  5. Sro5_g004720.1

Sro5_g004720.1 (Contig4001.g30787)


Aliases : Contig4001.g30787

Description : Oligosaccharide 1,2-alpha-mannosidase


Gene families : OG_01_0000216 (OrthoFinder) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro5_g004720.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold5286.3 5286.3 Glycoside hydrolase family 47; cDENN domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold9289.1 9289.1 Glycoside hydrolase family 47 [Interproscan]. 0.01 OrthoFinder
TP01G08040.1 No alias Glycoside hydrolase family 47 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01005432.1_cds_GFH31193.1_25670 HaLaN_30181, GFH31193 Alpha-1,2-mannosidase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP Enrichment
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004336 galactosylceramidase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
BP GO:0006677 glycosylceramide metabolic process IEP Enrichment
BP GO:0006681 galactosylceramide metabolic process IEP Enrichment
BP GO:0006683 galactosylceramide catabolic process IEP Enrichment
BP GO:0006687 glycosphingolipid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019374 galactolipid metabolic process IEP Enrichment
BP GO:0019376 galactolipid catabolic process IEP Enrichment
BP GO:0019377 glycolipid catabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030149 sphingolipid catabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046466 membrane lipid catabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046477 glycosylceramide catabolic process IEP Enrichment
BP GO:0046479 glycosphingolipid catabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046514 ceramide catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001382 Glyco_hydro_47 160 627
No external refs found!