Sro5_g004540.1 (Contig4001.g30769)

Aliases : Contig4001.g30769

Description : Blue-light-activated histidine kinase

Gene families : OG_01_0000313 (OrthoFinder) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro5_g004540.1
Cluster	HCCA: Cluster_204

Target	Alias	Description	ECC score	Gene Family Method
Cz10g14280.t1	No alias	PAS domain [Interproscan].	0.02	OrthoFinder
TP13G01600.1	No alias	PAS domain [Interproscan].	0.02	OrthoFinder
Transcript_contig_54042	54042	Protein kinase domain; PAS domain [Interproscan].	0.01	OrthoFinder
Vocar.0011s0213.1	32895196	Protein kinase domain; PAS domain [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01002218.1_cds_GFH23214.1_17691	HaLaN_20798, GFH23214	Putative LOV domain-containing protein	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496839.1_568	KAA8496839	Serine/threonine-protein kinase nrc-2	0.01	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495663.1_1661	KAA8495663	Serine/threonine-protein kinase KIN82	0.01	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8496025.1_2023	KAA8496025	Flippase kinase 1	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
MF	GO:0009055	electron transfer activity	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
MF	GO:0015035	protein-disulfide reductase activity	IEP	Enrichment
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004827	bZIP	153	200
IPR000014	PAS	263	353

External Links

No external refs found!