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  5. Sro5_g004150.1

Sro5_g004150.1 (Contig4001.g30730)


Aliases : Contig4001.g30730

Description : Leucine Rich Repeat


Gene families : OG_01_0000513 (OrthoFinder) Phylogenetic Tree(s): OG0000513_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro5_g004150.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Sro1130_g244560.1 Contig1486.g13586 Leucine Rich Repeat 0.03 OrthoFinder
Sro160_g072180.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro2166_g317280.1 Contig1985.g16988 STYKc 0.03 OrthoFinder
Sro2220_g319610.1 Contig1022.g10192 Leucine Rich Repeat 0.03 OrthoFinder
Sro3046_g342770.1 Contig1010.g10137 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro32_g021050.1 Contig3715.g28578 Receptor-like protein kinase precursor 0.03 OrthoFinder
Sro38_g023590.1 Contig1551.g14094 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro38_g023600.1 Contig1551.g14095 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment

No InterPro domains available for this sequence

No external refs found!