1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro59_g034240.1

Sro59_g034240.1 (Contig571.g7270)


Aliases : Contig571.g7270

Description : Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment)


Gene families : OG_01_0000155 (OrthoFinder) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro59_g034240.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.36 tig00000615_g2564.t1 Glyceraldehyde-3-phosphate dehydrogenase A,... 0.01 OrthoFinder
EOD10729 No alias Glycerinaldehyde-3-phosphate dehydrogenase,... 0.02 OrthoFinder
EOD29981 No alias Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.02 OrthoFinder
PTI_02G03340.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.03 OrthoFinder
PTI_15G03500.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.01 OrthoFinder
SymbC1.scaffold726.6 726.6 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding... 0.02 OrthoFinder
TP01G05370.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.01 OrthoFinder
TP05G05020.1 No alias Glyceraldehyde 3-phosphate dehydrogenase, catalytic... 0.01 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33588.1_3372 PRW33588 Glyceraldehyde-3-phosphate cytosolic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEA Interproscan
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000652 Triosephosphate_isomerase 32 270
IPR020829 GlycerAld_3-P_DH_cat 436 593
IPR020828 GlycerAld_3-P_DH_NAD(P)-bd 282 383
No external refs found!