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  5. Sro59_g034220.1

Sro59_g034220.1 (Contig571.g7268)


Aliases : Contig571.g7268

Description : Branchpoint-bridging protein


Gene families : OG_01_0001291 (OrthoFinder) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro59_g034220.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cre09.g386731 30780511 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Dusal.0009s00049.1 33190467 Splicing factor 1, helix-hairpin domain; K Homology... 0.03 OrthoFinder
PTI_12G03380.1 No alias K Homology domain, type 1; Splicing factor 1,... 0.02 OrthoFinder
XM_003061317.1 MicpuC2_50949, 50949 K Homology domain, type 1; Splicing factor 1,... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498516.1_7469 KAA8498516 Protein quaking-A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 253 326
IPR032570 SF1-HH 131 227
No external refs found!