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  5. Sro58_g033720.1

Sro58_g033720.1 (Contig64.g566)


Aliases : Contig64.g566

Description : SET


Gene families : OG_01_0006137 (OrthoFinder) Phylogenetic Tree(s): OG0006137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro58_g033720.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Sro1444_g273270.1 Contig2917.g23219 Zinc finger, MYND-type [Interproscan]. 0.04 OrthoFinder
Sro5_g004190.1 Contig4001.g30734 Zinc finger, MYND-type [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 29 69
No external refs found!