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  5. Sro583_g170610.1

Sro583_g170610.1 (Contig323.g4292)


Aliases : Contig323.g4292

Description : Hypothetical protein


Gene families : OG_01_0002963 (OrthoFinder) Phylogenetic Tree(s): OG0002963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro583_g170610.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cz12g21100.t1 No alias SnoaL-like domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_5071 5071 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment

No InterPro domains available for this sequence

No external refs found!