Sro582_g170560.1 (Contig2996.g23812)


Aliases : Contig2996.g23812

Description : Alanine--tRNA ligase


Gene families : OG_01_0000762 (OrthoFinder) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro582_g170560.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Cre02.g143200 30784969 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Cre08.g368900 30773527 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 OrthoFinder
Cz11g07090.t1 No alias Alanyl-tRNA synthetase, class IIc, N-terminal; DHHA1... 0.03 OrthoFinder
Dusal.0383s00009.1 33199473 Alanyl-tRNA synthetase, class IIc, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD18926 No alias Alanyl-tRNA synthetase [Ensembl]. 0.02 OrthoFinder
EOD34337 No alias Alanyl-tRNA synthetase [Ensembl]. 0.03 OrthoFinder
OT_07G01920.1 No alias Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA... 0.05 OrthoFinder
PTI_15G03160.1 No alias DHHA1 domain; Alanyl-tRNA synthetase, class IIc,... 0.02 OrthoFinder
PTI_18G00380.1 No alias DHHA1 domain; Alanyl-tRNA synthetase, class IIc,... 0.04 OrthoFinder
UNPLg00218.t1 No alias Threonyl/alanyl tRNA synthetase, SAD; DHHA1 domain;... 0.01 OrthoFinder
Vocar.0020s0078.1 32886644 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.04 OrthoFinder
XM_002500017.1 MICPUN_79369, 79369 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.02 OrthoFinder
XM_002504787.1 MICPUN_62346, 62346 Alanyl-tRNA synthetase 0.03 OrthoFinder
XM_003057820.1 MicpuC2_16345, 16345 DHHA1 domain; Threonyl/alanyl tRNA synthetase, SAD;... 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58002.1_8495 PRW58002 Alanine-tRNA ligase isoform A 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494101.1_3965 KAA8494101 Alanine--tRNA ligase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004813 alanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006419 alanyl-tRNA aminoacylation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003156 DHHA1_dom 866 1012
IPR018164 Ala-tRNA-synth_IIc_N 72 639
IPR012947 tRNA_SAD 762 805
No external refs found!