1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro57_g033500.1

Sro57_g033500.1 (Contig284.g3718)


Aliases : Contig284.g3718

Description : Hypothetical protein


Gene families : OG_01_0000220 (OrthoFinder) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro57_g033500.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Sro116_g056940.1 Contig2228.g18470 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder
Sro144_g067110.1 Contig3873.g29810 ECF subfamily RNA polymerase sigma-24 subunit 0.12 OrthoFinder
Sro1513_g278830.1 Contig507.g6747 ECF subfamily RNA polymerase sigma-24 subunit 0.04 OrthoFinder
Sro212_g088130.1 Contig3756.g28796 Signal recognition particle-docking protein FtsY 0.03 OrthoFinder
Sro260_g101600.1 Contig1663.g15012 Hypothetical protein 0.04 OrthoFinder
Sro8_g006570.1 Contig89.g970 Membrane 0.03 OrthoFinder
Sro8_g006680.1 Contig89.g981 Mucin 5B, oligomeric mucus gel-forming 0.03 OrthoFinder
Sro8_g006730.1 Contig89.g986 ECF subfamily RNA polymerase sigma-24 subunit 0.11 OrthoFinder
Sro8_g006820.1 Contig89.g995 ECF subfamily RNA polymerase sigma-24 subunit 0.03 OrthoFinder
Sro8_g006830.1 Contig89.g996 Hemolysin-type calcium-binding repeat (2 copies) 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!