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  5. Sro576_g169520.1

Sro576_g169520.1 (Contig2441.g19996)


Aliases : Contig2441.g19996

Description : Like/WD repeat-containing protein TBL1X


Gene families : OG_01_0012395 (OrthoFinder) Phylogenetic Tree(s): OG0012395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro576_g169520.1
Cluster HCCA: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
PTI_28G00200.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 730 766
IPR001680 WD40_repeat 775 810
IPR001680 WD40_repeat 878 902
IPR001680 WD40_repeat 820 852
IPR001680 WD40_repeat 646 684
No external refs found!